Pseudomonas protegens Pf-5, PFL_3248

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3248
Name
Replicon chromosome
Genomic location 3749363 - 3750544 (- strand)

Cross-References

RefSeq YP_260353.1
GI 70730612
Entrez 3477868
INSDC AAY92517.1
NCBI Locus Tag PFL_3248
UniParc UPI000054D7B6
UniProtKB Acc Q4KBN0
UniProtKB ID Q4KBN0_PSEF5
UniRef100 UniRef100_Q4KBN0
UniRef50 UniRef50_Q4KBN0
UniRef90 UniRef90_Q4KBN0

Product

Feature Type CDS
Coding Frame 1
Product Name
response regulator/sensor histidine kinase
Synonyms
Evidence for Translation
Charge (pH 7) -5.81
Kyte-Doolittle Hydrophobicity Value -0.165
Molecular Weight (kDa) 44119.3
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 621 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016488 (222 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3248

Human Homologs

References

No references are associated with this feature.