Pseudomonas protegens Pf-5, PFL_3259

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3259
Name
Replicon chromosome
Genomic location 3763283 - 3764488 (+ strand)

Cross-References

RefSeq YP_260364.1
GI 70730623
Entrez 3477801
INSDC AAY92528.1
NCBI Locus Tag PFL_3259
UniParc UPI000054D7C1
UniProtKB Acc Q4KBL9
UniProtKB ID Q4KBL9_PSEF5
UniRef100 UniRef100_Q4KBL9
UniRef50 UniRef50_I2BF19
UniRef90 UniRef90_Q4KBL9

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 12.06
Kyte-Doolittle Hydrophobicity Value 0.841
Molecular Weight (kDa) 42281.9
Isoelectric Point (pI) 10.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 280 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020440 (5 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3259

Human Homologs

References

No references are associated with this feature.