Pseudomonas protegens Pf-5, PFL_3262

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3262
Name
Replicon chromosome
Genomic location 3766939 - 3767418 (+ strand)

Cross-References

RefSeq YP_260367.1
GI 70730626
Entrez 3477804
INSDC AAY92531.1
NCBI Locus Tag PFL_3262
UniParc UPI000054D7C4
UniProtKB Acc Q4KBL6
UniProtKB ID Q4KBL6_PSEF5
UniRef100 UniRef100_Q4KBL6
UniRef50 UniRef50_G0E8S3
UniRef90 UniRef90_Q4KBL6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.07
Kyte-Doolittle Hydrophobicity Value -0.955
Molecular Weight (kDa) 19.0
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2IMJ STRUCTURAL GENOMICS, UNKNOWN FUNCTION 10/04/06 X-ray Crystal Structure of Protein PFL_3262 from Pseudomonas fluorescens. Northeast Structural Genomics Consortium Target PlR14. Pseudomonas fluorescens Pf-5 1.5 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 135 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004952 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3262

Human Homologs

References

No references are associated with this feature.