Pseudomonas protegens Pf-5, PFL_3264

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3264
Name
Replicon chromosome
Genomic location 3769055 - 3770290 (+ strand)

Cross-References

RefSeq YP_260369.1
GI 70730628
Entrez 3477806
INSDC AAY92533.1
NCBI Locus Tag PFL_3264
UniParc UPI000054D7C6
UniProtKB Acc Q4KBL4
UniProtKB ID Q4KBL4_PSEF5
UniRef100 UniRef100_Q4KBL4
UniRef50 UniRef50_J7J8D1
UniRef90 UniRef90_Q4KBL4

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.57
Kyte-Doolittle Hydrophobicity Value -0.245
Molecular Weight (kDa) 44.9
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 275 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003183 (396 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3264

Human Homologs

References

No references are associated with this feature.