Pseudomonas protegens Pf-5, PFL_3265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3265
Name
Replicon chromosome
Genomic location 3770579 - 3771358 (+ strand)

Cross-References

RefSeq YP_260370.1
GI 70730629
Entrez 3477807
INSDC AAY92534.1
NCBI Locus Tag PFL_3265
UniParc UPI000054D7C7
UniProtKB Acc Q4KBL3
UniProtKB ID Q4KBL3_PSEF5
UniRef100 UniRef100_Q4KBL3
UniRef50 UniRef50_E2XRF3
UniRef90 UniRef90_Q4KBL3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.12
Kyte-Doolittle Hydrophobicity Value 0.769
Molecular Weight (kDa) 27.4
Isoelectric Point (pI) 10.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 297 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003574 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3265

Human Homologs

References

No references are associated with this feature.