Pseudomonas protegens Pf-5, PFL_3278

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3278
Name
Replicon chromosome
Genomic location 3782613 - 3784988 (- strand)

Cross-References

RefSeq YP_260383.1
GI 70730642
Entrez 3477820
INSDC AAY92547.1
NCBI Locus Tag PFL_3278
UniParc UPI000054D7D4
UniProtKB Acc Q4KBK0
UniProtKB ID Q4KBK0_PSEF5
UniRef100 UniRef100_Q4KBK0
UniRef50 UniRef50_Q1ICP9
UniRef90 UniRef90_Q1ICP9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.87
Kyte-Doolittle Hydrophobicity Value 0.354
Molecular Weight (kDa) 87.3
Isoelectric Point (pI) 7.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 230 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002513 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3278

Human Homologs

References

No references are associated with this feature.