Pseudomonas protegens Pf-5, PFL_3279

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3279
Name
Replicon chromosome
Genomic location 3785021 - 3786070 (- strand)

Cross-References

RefSeq YP_260384.1
GI 70730643
Entrez 3477821
INSDC AAY92548.1
NCBI Locus Tag PFL_3279
UniParc UPI000054D7D5
UniProtKB Acc Q4KBJ9
UniProtKB ID Q4KBJ9_PSEF5
UniRef100 UniRef100_Q4KBJ9
UniRef50 UniRef50_Q4ZVS4
UniRef90 UniRef90_Q4KBJ9

Product

Feature Type CDS
Coding Frame 1
Product Name
BNR/Asp-box repeat domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -12.55
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 36874.0
Isoelectric Point (pI) 4.58

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 136 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002512 (525 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3279

Human Homologs

References

No references are associated with this feature.