Pseudomonas protegens Pf-5, PFL_3311

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3311
Name
Replicon chromosome
Genomic location 3820743 - 3823187 (+ strand)

Cross-References

RefSeq YP_260416.1
GI 70730675
Entrez 3476321
INSDC AAY92580.1
NCBI Locus Tag PFL_3311
UniParc UPI000054D7F5
UniProtKB Acc Q4KBG7
UniProtKB ID Q4KBG7_PSEF5
UniRef100 UniRef100_Q4KBG7
UniRef50 UniRef50_Q4KBG7
UniRef90 UniRef90_Q4KBG7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -11.61
Kyte-Doolittle Hydrophobicity Value -0.209
Molecular Weight (kDa) 90092.1
Isoelectric Point (pI) 6.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004968 (307 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3311

Human Homologs

References

No references are associated with this feature.