Pseudomonas protegens Pf-5, PFL_3344

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3344
Name
Replicon chromosome
Genomic location 3861602 - 3862240 (- strand)

Cross-References

RefSeq YP_260449.1
GI 70730708
Entrez 3476120
INSDC AAY92613.1
NCBI Locus Tag PFL_3344
UniParc UPI000054D816
UniProtKB Acc Q4KBD4
UniProtKB ID Q4KBD4_PSEF5
UniRef100 UniRef100_Q4KBD4
UniRef50 UniRef50_Q48PB1
UniRef90 UniRef90_C3K8J3

Product

Feature Type CDS
Coding Frame 1
Product Name
aldolase
Synonyms
Evidence for Translation
Charge (pH 7) -2.86
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 23.2
Isoelectric Point (pI) 6.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 404 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG018867 (61 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3344
Search term: aldolase

Human Homologs

References

No references are associated with this feature.