Pseudomonas protegens Pf-5, PFL_3434 (fabF_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3434
Name
fabF_2
Replicon chromosome
Genomic location 3950291 - 3951559 (+ strand)

Cross-References

RefSeq YP_260538.1
GI 70730797
EC Number 2.3.1.179
Entrez 3477663
INSDC AAY92702.1
NCBI Locus Tag PFL_3434
UniParc UPI000054D86F
UniProtKB Acc Q4KB45
UniProtKB ID Q4KB45_PSEF5
UniRef100 UniRef100_Q4KB45
UniRef50 UniRef50_P56902
UniRef90 UniRef90_Q4KB45

Product

Feature Type CDS
Coding Frame 1
Product Name
3-oxoacyl-ACP synthase
Synonyms
Evidence for Translation
Charge (pH 7) -6.15
Kyte-Doolittle Hydrophobicity Value 0.017
Molecular Weight (kDa) 43702.0
Isoelectric Point (pI) 5.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 572 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001303 (401 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3434
Search term: fabF_2

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-oxoacyl-ACP synthase, mitochondrial [Source:HGNC Symbol;Acc:HGNC:26063]
E-value: 1.7e-85
Percent Identity: 43.7

References

No references are associated with this feature.