Pseudomonas protegens Pf-5, PFL_3470

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3470
Name
Replicon chromosome
Genomic location 3987716 - 3988864 (+ strand)

Cross-References

RefSeq YP_260573.1
GI 70730832
EC Number 2.6.1.-
Entrez 3475504
INSDC AAY92737.1
NCBI Locus Tag PFL_3470
UniParc UPI000054D892
UniProtKB Acc Q4KB10
UniProtKB ID Q4KB10_PSEF5
UniRef100 UniRef100_Q4KB10
UniRef50 UniRef50_K9NKP0
UniRef90 UniRef90_Q4KB10

Product

Feature Type CDS
Coding Frame 1
Product Name
aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.53
Kyte-Doolittle Hydrophobicity Value -0.074
Molecular Weight (kDa) 42.2
Isoelectric Point (pI) 5.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 637 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020502 (77 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3470
Search term: aminotransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14
kynurenine aminotransferase 3 [Source:HGNC Symbol;Acc:HGNC:33238]
E-value: 7.1e-14
Percent Identity: 32.9
Ensembl 110, assembly GRCh38.p14
kynurenine aminotransferase 3 [Source:HGNC Symbol;Acc:HGNC:33238]
E-value: 7.1e-14
Percent Identity: 32.9

References

No references are associated with this feature.