Pseudomonas protegens Pf-5, PFL_3837

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3837
Name
Replicon chromosome
Genomic location 4438157 - 4439104 (+ strand)

Cross-References

RefSeq YP_260937.1
GI 70731196
Entrez 3476239
INSDC AAY93101.1
NCBI Locus Tag PFL_3837
UniParc UPI000054D9FC
UniProtKB Acc Q4K9Z6
UniProtKB ID Q4K9Z6_PSEF5
UniRef100 UniRef100_Q4K9Z6
UniRef50 UniRef50_Q4K9Z6
UniRef90 UniRef90_Q4K9Z6

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 0.52
Kyte-Doolittle Hydrophobicity Value 0.131
Molecular Weight (kDa) 33969.8
Isoelectric Point (pI) 7.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 537 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015548 (62 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3837

Human Homologs

References

No references are associated with this feature.