Pseudomonas protegens Pf-5, PFL_3838

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3838
Name
Replicon chromosome
Genomic location 4439153 - 4440472 (+ strand)

Cross-References

RefSeq YP_260938.1
GI 70731197
Entrez 3476240
INSDC AAY93102.1
NCBI Locus Tag PFL_3838
UniParc UPI000054D9FD
UniProtKB Acc Q4K9Z5
UniProtKB ID Q4K9Z5_PSEF5
UniRef100 UniRef100_Q4K9Z5
UniRef50 UniRef50_Q8P351
UniRef90 UniRef90_Q4K9Z5

Product

Feature Type CDS
Coding Frame 1
Product Name
major facilitator family transporter
Synonyms
Evidence for Translation
Charge (pH 7) 10.06
Kyte-Doolittle Hydrophobicity Value 0.710
Molecular Weight (kDa) 47590.7
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 258 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020660 (15 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3838

Human Homologs

References

No references are associated with this feature.