Pseudomonas protegens Pf-5, PFL_3846

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3846
Name
Replicon chromosome
Genomic location 4447822 - 4448595 (+ strand)

Cross-References

RefSeq YP_260946.2
GI 346643084
Entrez 3476248
INSDC AAY93110.2
NCBI Locus Tag PFL_3846
UniParc UPI00021A0051
UniProtKB Acc Q4K9Y7
UniProtKB ID Q4K9Y7_PSEF5
UniRef100 UniRef100_Q4K9Y7
UniRef50 UniRef50_Q4K9Y7
UniRef90 UniRef90_Q4K9Y7

Product

Feature Type CDS
Coding Frame 1
Product Name
HNH endonuclease domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.01
Kyte-Doolittle Hydrophobicity Value -0.460
Molecular Weight (kDa) 28582.2
Isoelectric Point (pI) 8.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 93 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000792 (117 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3846

Human Homologs

References

No references are associated with this feature.