Pseudomonas protegens Pf-5, PFL_3861 (catC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3861
Name
catC
Replicon chromosome
Genomic location 4462783 - 4463073 (- strand)

Cross-References

RefSeq YP_260961.1
GI 70731220
EC Number 5.3.3.4
Entrez 3476263
INSDC AAY93125.1
NCBI Locus Tag PFL_3861
UniParc UPI000054DA14
UniProtKB Acc Q4K9X2
UniProtKB ID Q4K9X2_PSEF5
UniRef100 UniRef100_Q4K9X2
UniRef50 UniRef50_P00948
UniRef90 UniRef90_Q4K9X2

Product

Feature Type CDS
Coding Frame 1
Product Name
muconolactone delta-isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -2.84
Kyte-Doolittle Hydrophobicity Value -0.352
Molecular Weight (kDa) 11.2
Isoelectric Point (pI) 5.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003052 (465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3861
Search term: catC

Human Homologs

References

No references are associated with this feature.