Pseudomonas protegens Pf-5, PFL_4015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4015
Name
Replicon chromosome
Genomic location 4634351 - 4635019 (- strand)

Cross-References

RefSeq YP_261112.1
GI 70731371
Entrez 3477770
INSDC AAY93276.1
NCBI Locus Tag PFL_4015
UniParc UPI000054DAA8
UniProtKB Acc Q4K9H1
UniProtKB ID Q4K9H1_PSEF5
UniRef100 UniRef100_Q4K9H1
UniRef50 UniRef50_Q0C2L9
UniRef90 UniRef90_Q4K9H1

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.63
Kyte-Doolittle Hydrophobicity Value -0.291
Molecular Weight (kDa) 24854.0
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 624 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002900 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4015

Human Homologs

References

No references are associated with this feature.