Pseudomonas protegens Pf-5, PFL_4033 (codA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4033
Name
codA
Replicon chromosome
Genomic location 4648736 - 4649992 (+ strand)

Cross-References

RefSeq YP_261130.1
GI 70731389
EC Number 3.5.4.1
Entrez 3477788
INSDC AAY93294.1
NCBI Locus Tag PFL_4033
UniParc UPI000054DABA
UniProtKB Acc Q4K9F3
UniProtKB ID Q4K9F3_PSEF5
UniRef100 UniRef100_Q4K9F3
UniRef50 UniRef50_G8Q551
UniRef90 UniRef90_G8Q551

Product

Feature Type CDS
Coding Frame 1
Product Name
cytosine deaminase
Synonyms
Evidence for Translation
Charge (pH 7) -9.38
Kyte-Doolittle Hydrophobicity Value -0.248
Molecular Weight (kDa) 46314.1
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 188 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000428 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4033
Search term: codA

Human Homologs

References

No references are associated with this feature.