Pseudomonas protegens Pf-5, PFL_4180

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4180
Name
Replicon chromosome
Genomic location 4852828 - 4854153 (- strand)

Cross-References

RefSeq YP_261272.1
GI 70731531
Entrez 3476918
INSDC AAY93436.1
NCBI Locus Tag PFL_4180
UniParc UPI000054DB47
UniProtKB Acc Q4K911
UniProtKB ID Q4K911_PSEF5
UniRef100 UniRef100_Q4K911
UniRef50 UniRef50_Q4K911
UniRef90 UniRef90_Q4K911

Product

Feature Type CDS
Coding Frame 1
Product Name
sensor histidine kinase
Synonyms
Evidence for Translation
Charge (pH 7) 5.17
Kyte-Doolittle Hydrophobicity Value -0.072
Molecular Weight (kDa) 48.5
Isoelectric Point (pI) 8.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 607 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003073 (489 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4180

Human Homologs

References

No references are associated with this feature.