Pseudomonas protegens Pf-5, PFL_4270

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4270
Name
Replicon chromosome
Genomic location 4966585 - 4967490 (- strand)

Cross-References

RefSeq YP_261362.1
GI 70731621
Entrez 3477396
INSDC AAY93526.1
NCBI Locus Tag PFL_4270
UniParc UPI000054DBA0
UniProtKB Acc Q4K8S1
UniProtKB ID Q4K8S1_PSEF5
UniRef100 UniRef100_Q4K8S1
UniRef50 UniRef50_B3PGU2
UniRef90 UniRef90_Q4K8S1

Product

Feature Type CDS
Coding Frame 1
Product Name
5'-nucleotidase
Synonyms
Evidence for Translation
Charge (pH 7) -10.09
Kyte-Doolittle Hydrophobicity Value -0.058
Molecular Weight (kDa) 32483.1
Isoelectric Point (pI) 4.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 80 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015753 (201 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4270
Search term: 5'-nucleotidase

Human Homologs

Ensembl 110, assembly GRCh38.p14
5'-nucleotidase, cytosolic IA [Source:HGNC Symbol;Acc:HGNC:17819]
E-value: 5.1e-60
Percent Identity: 44.5

References

No references are associated with this feature.