Pseudomonas protegens Pf-5, PFL_4272

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4272
Name
Replicon chromosome
Genomic location 4968478 - 4968864 (- strand)

Cross-References

RefSeq YP_261364.1
GI 70731623
Entrez 3477398
INSDC AAY93528.1
NCBI Locus Tag PFL_4272
UniParc UPI000054DBA2
UniProtKB Acc Q4K8R9
UniProtKB ID Q4K8R9_PSEF5
UniRef100 UniRef100_Q4K8R9
UniRef50 UniRef50_E5U1P0
UniRef90 UniRef90_Q4K8R9

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -8.65
Kyte-Doolittle Hydrophobicity Value 0.019
Molecular Weight (kDa) 14.2
Isoelectric Point (pI) 4.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003642 (422 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4272
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.