Pseudomonas protegens Pf-5, PFL_4273

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4273
Name
Replicon chromosome
Genomic location 4968863 - 4969297 (+ strand)

Cross-References

RefSeq YP_261365.2
GI 346643128
Entrez 3477399
INSDC AAY93529.2
NCBI Locus Tag PFL_4273
UniParc UPI00021A0031
UniProtKB Acc Q4K8R8
UniProtKB ID Q4K8R8_PSEF5
UniRef100 UniRef100_Q4K8R8
UniRef50 UniRef50_K0X5T4
UniRef90 UniRef90_Q4K8R8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.49
Kyte-Doolittle Hydrophobicity Value -0.438
Molecular Weight (kDa) 16.7
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020752 (108 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4273

Human Homologs

References

No references are associated with this feature.