Pseudomonas protegens Pf-5, PFL_4274 (aroF_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4274
Name
aroF_2
Replicon chromosome
Genomic location 4969438 - 4970514 (+ strand)

Cross-References

RefSeq YP_261366.1
GI 70731625
EC Number 2.5.1.54
Entrez 3477400
INSDC AAY93530.1
NCBI Locus Tag PFL_4274
UniParc UPI000054DBA4
UniProtKB Acc Q4K8R7
UniProtKB ID Q4K8R7_PSEF5
UniRef100 UniRef100_Q4K8R7
UniRef50 UniRef50_P14843
UniRef90 UniRef90_Q883S5

Product

Feature Type CDS
Coding Frame 1
Product Name
phospho-2-dehydro-3-deoxyheptonate aldolase
Synonyms
Evidence for Translation
Charge (pH 7) -3.74
Kyte-Doolittle Hydrophobicity Value -0.187
Molecular Weight (kDa) 39.0
Isoelectric Point (pI) 6.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 260 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003643 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4274
Search term: aroF_2

Human Homologs

References

No references are associated with this feature.