Pseudomonas protegens Pf-5, PFL_4275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4275
Name
Replicon chromosome
Genomic location 4970575 - 4970856 (- strand)

Cross-References

RefSeq YP_261367.1
GI 70731626
Entrez 3477401
INSDC AAY93531.1
NCBI Locus Tag PFL_4275
UniParc UPI000054DBA5
UniProtKB Acc Q4K8R6
UniProtKB ID Q4K8R6_PSEF5
UniRef100 UniRef100_Q4K8R6
UniRef50 UniRef50_A4XVE3
UniRef90 UniRef90_G8Q1W3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.39
Kyte-Doolittle Hydrophobicity Value -0.510
Molecular Weight (kDa) 10.7
Isoelectric Point (pI) 7.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 129 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003644 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4275

Human Homologs

References

No references are associated with this feature.