Pseudomonas protegens Pf-5, PFL_4276

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4276
Name
Replicon chromosome
Genomic location 4971876 - 4972868 (- strand)

Cross-References

RefSeq YP_261368.1
GI 70731627
Entrez 3477402
INSDC AAY93532.1
NCBI Locus Tag PFL_4276
UniParc UPI000054DBA6
UniProtKB Acc Q4K8R5
UniProtKB ID Q4K8R5_PSEF5
UniRef100 UniRef100_Q4K8R5
UniRef50 UniRef50_A0A0B7DBL0
UniRef90 UniRef90_A0A0B7DBL0

Product

Feature Type CDS
Coding Frame 1
Product Name
ErfK/YbiS/YcfS/YnhG family protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.66
Kyte-Doolittle Hydrophobicity Value -0.027
Molecular Weight (kDa) 35592.8
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 191 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002715 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4276

Human Homologs

References

No references are associated with this feature.