Pseudomonas protegens Pf-5, PFL_4281 (greB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4281
Name
greB
Replicon chromosome
Genomic location 4977172 - 4977645 (- strand)

Cross-References

RefSeq YP_261373.1
GI 70731632
Entrez 3477407
INSDC AAY93537.1
NCBI Locus Tag PFL_4281
UniParc UPI000054DBAB
UniProtKB Acc Q4K8R0
UniProtKB ID Q4K8R0_PSEF5
UniRef100 UniRef100_Q4K8R0
UniRef50 UniRef50_P30128
UniRef90 UniRef90_Q4K8R0

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription elongation factor GreB
Synonyms
Evidence for Translation
Charge (pH 7) -0.80
Kyte-Doolittle Hydrophobicity Value -0.673
Molecular Weight (kDa) 18.6
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 508 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002710 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4281
Search term: greB

Human Homologs

References

No references are associated with this feature.