Pseudomonas protegens Pf-5, PFL_4282

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4282
Name
Replicon chromosome
Genomic location 4977938 - 4978567 (+ strand)

Cross-References

RefSeq YP_261374.1
GI 70731633
Entrez 3477408
INSDC AAY93538.1
NCBI Locus Tag PFL_4282
UniParc UPI000054DBAC
UniProtKB Acc Q4K8Q9
UniProtKB ID Q4K8Q9_PSEF5
UniRef100 UniRef100_Q4K8Q9
UniRef50 UniRef50_Q4K8Q9
UniRef90 UniRef90_Q4K8Q9

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.09
Kyte-Doolittle Hydrophobicity Value 0.208
Molecular Weight (kDa) 22.8
Isoelectric Point (pI) 8.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG020753 (17 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4282

Human Homologs

References

No references are associated with this feature.