Pseudomonas protegens Pf-5, PFL_4372

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4372
Name
Replicon chromosome
Genomic location 5078371 - 5079156 (+ strand)

Cross-References

RefSeq YP_261464.1
GI 70731722
Entrez 3478495
INSDC AAY93627.1
NCBI Locus Tag PFL_4372
UniParc UPI000054DC06
UniProtKB Acc Q4K8G9
UniProtKB ID Q4K8G9_PSEF5
UniRef100 UniRef100_Q4K8G9
UniRef50 UniRef50_S3MEG3
UniRef90 UniRef90_Q4K8G9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.84
Kyte-Doolittle Hydrophobicity Value -0.464
Molecular Weight (kDa) 30.1
Isoelectric Point (pI) 4.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 39 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000163 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4372

Human Homologs

References

No references are associated with this feature.