Pseudomonas protegens Pf-5, PFL_4558

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4558
Name
Replicon chromosome
Genomic location 5270476 - 5270910 (- strand)

Cross-References

RefSeq YP_261642.1
GI 70731900
Entrez 3478673
INSDC AAY93805.1
NCBI Locus Tag PFL_4558
UniParc UPI000054DCB6
UniProtKB Acc Q4K7Z1
UniProtKB ID Q4K7Z1_PSEF5
UniRef100 UniRef100_Q4K7Z1
UniRef50 UniRef50_Q4K7Z1
UniRef90 UniRef90_Q4K7Z1

Product

Feature Type CDS
Coding Frame 1
Product Name
transmembrane pair family protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.91
Kyte-Doolittle Hydrophobicity Value 0.735
Molecular Weight (kDa) 16.6
Isoelectric Point (pI) 8.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 88 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002692 (838 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4558

Human Homologs

References

No references are associated with this feature.