Pseudomonas protegens Pf-5, PFL_4843
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
| Locus Tag |
PFL_4843
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5586952 - 5588046 (- strand) |
Cross-References
| RefSeq | YP_261924.1 |
| GI | 70732168 |
| Entrez | 3479254 |
| INSDC | AAY94073.1 |
| NCBI Locus Tag | PFL_4843 |
| UniParc | UPI000054DDCF |
| UniProtKB Acc | Q4K759 |
| UniProtKB ID | Q4K759_PSEF5 |
| UniRef100 | UniRef100_Q4K759 |
| UniRef50 | UniRef50_A4G4Z1 |
| UniRef90 | UniRef90_G8Q6W5 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.64 |
| Kyte-Doolittle Hydrophobicity Value | 0.159 |
| Molecular Weight (kDa) | 38.5 |
| Isoelectric Point (pI) | 4.76 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 646 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002161 (551 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_4843
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
nucleotide binding protein like [Source:HGNC Symbol;Acc:HGNC:20278]
E-value:
1.4e-69
Percent Identity:
50.4
|
References
No references are associated with this feature.