Pseudomonas protegens Pf-5, PFL_5053

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5053
Name
Replicon chromosome
Genomic location 5812707 - 5814032 (+ strand)

Cross-References

RefSeq YP_262132.1
GI 70732376
Entrez 3479463
INSDC AAY94281.1
NCBI Locus Tag PFL_5053
UniParc UPI000054DE9F
UniProtKB Acc Q4K6K1
UniProtKB ID Q4K6K1_PSEF5
UniRef100 UniRef100_Q4K6K1
UniRef50 UniRef50_V6A7C8
UniRef90 UniRef90_Q4K6K1

Product

Feature Type CDS
Coding Frame 1
Product Name
OprD family outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -5.84
Kyte-Doolittle Hydrophobicity Value -0.413
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 5.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000160 (448 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5053

Human Homologs

References

No references are associated with this feature.