Pseudomonas protegens Pf-5, PFL_5063 (murD)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_5063
Name	murD
Replicon	chromosome
Genomic location	5824874 - 5826220 (- strand)

Cross-References

RefSeq	YP_262142.1
GI	70732386
EC Number	6.3.2.9
Entrez	3479473
INSDC	AAY94291.1
NCBI Locus Tag	PFL_5063
UniParc	UPI000054DEA9
UniProtKB Acc	Q4K6J1
UniProtKB ID	MURD_PSEF5
UniRef100	UniRef100_Q4K6J1
UniRef50	UniRef50_Q9HVZ9
UniRef90	UniRef90_Q4K6J1

Product

Feature Type	CDS
Coding Frame	1
Product Name	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.27
Kyte-Doolittle Hydrophobicity Value	0.072
Molecular Weight (kDa)	47926.2
Isoelectric Point (pI)	5.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 576 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004004 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_5063 Search term: murD Search term: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase

Human Homologs

References