Pseudomonas protegens Pf-5, PFL_5358 (katB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5358
Name
katB
Replicon chromosome
Genomic location 6127939 - 6129480 (- strand)

Cross-References

RefSeq YP_262426.2
GI 346643246
EC Number 1.11.1.6
Entrez 3479750
INSDC AAY94568.2
NCBI Locus Tag PFL_5358
UniParc UPI00021A00CF
UniProtKB Acc Q4K5Q7
UniProtKB ID Q4K5Q7_PSEF5
UniRef100 UniRef100_Q4K5Q7
UniRef50 UniRef50_Q8Y3P9
UniRef90 UniRef90_Q4K5Q7

Product

Feature Type CDS
Coding Frame 1
Product Name
catalase KatB
Synonyms
Evidence for Translation
Charge (pH 7) 3.14
Kyte-Doolittle Hydrophobicity Value -0.496
Molecular Weight (kDa) 56.9
Isoelectric Point (pI) 8.03

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 319 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001474 (1465 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5358
Search term: katB
Search term: catalase KatB

Human Homologs

Ensembl 110, assembly GRCh38.p14
catalase [Source:HGNC Symbol;Acc:HGNC:1516]
E-value: 7.8e-101
Percent Identity: 41.6

References

No references are associated with this feature.