Pseudomonas protegens Pf-5, PFL_5491 (gmd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5491
Name
gmd
Replicon chromosome
Genomic location 6266539 - 6267573 (- strand)

Cross-References

RefSeq YP_262559.1
GI 70728942
EC Number 4.2.1.47
Entrez 3476673
INSDC AAY90847.1
NCBI Locus Tag PFL_5491
UniParc UPI000054E046
UniProtKB Acc Q4K5C4
UniProtKB ID Q4K5C4_PSEF5
UniRef100 UniRef100_Q4K5C4
UniRef50 UniRef50_Q9JRN5
UniRef90 UniRef90_Q4K5C4

Product

Feature Type CDS
Coding Frame 1
Product Name
GDP-mannose 4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -5.09
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 38704.7
Isoelectric Point (pI) 5.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004999 (389 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5491
Search term: gmd

Human Homologs

Ensembl 97, assembly GRCh38.p12
GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369]
E-value: 1.7e-95
Percent Identity: 52.2

References

No references are associated with this feature.