Pseudomonas protegens Pf-5, PFL_5664

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5664
Name
Replicon chromosome
Genomic location 6451955 - 6455698 (+ strand)

Cross-References

RefSeq YP_262723.2
GI 346643273
Entrez 3480039
INSDC AAY94857.2
NCBI Locus Tag PFL_5664
UniParc UPI00021A0071
UniProtKB Acc Q4K4W0
UniProtKB ID Q4K4W0_PSEF5
UniRef100 UniRef100_Q4K4W0
UniRef50 UniRef50_Q4K4W0
UniRef90 UniRef90_Q4K4W0

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -35.40
Kyte-Doolittle Hydrophobicity Value -0.163
Molecular Weight (kDa) 140206.2
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 566 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000558 (491 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5664

Human Homologs

References

No references are associated with this feature.