Pseudomonas protegens Pf-5, PFL_5686

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5686
Name
Replicon chromosome
Genomic location 6480780 - 6482072 (- strand)

Cross-References

RefSeq YP_262744.1
GI 70732971
Entrez 3480058
INSDC AAY94876.1
NCBI Locus Tag PFL_5686
UniParc UPI000054E0F1
UniProtKB Acc Q4K4T9
UniProtKB ID Q4K4T9_PSEF5
UniRef100 UniRef100_Q4K4T9
UniRef50 UniRef50_K9NQ36
UniRef90 UniRef90_K9NQ36

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase (GGDEF) domain membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 10.46
Kyte-Doolittle Hydrophobicity Value 0.207
Molecular Weight (kDa) 48.3
Isoelectric Point (pI) 9.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 450 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015098 (225 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5686

Human Homologs

References

No references are associated with this feature.