Pseudomonas protegens Pf-5, PFL_5696

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5696
Name
Replicon chromosome
Genomic location 6491108 - 6493012 (+ strand)

Cross-References

RefSeq YP_262754.1
GI 70732981
Entrez 3480068
INSDC AAY94886.1
NCBI Locus Tag PFL_5696
UniParc UPI000054E0FB
UniProtKB Acc Q4K4S9
UniProtKB ID Q4K4S9_PSEF5
UniRef100 UniRef100_Q4K4S9
UniRef50 UniRef50_Q3K5N8
UniRef90 UniRef90_Q4K4S9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.34
Kyte-Doolittle Hydrophobicity Value -0.516
Molecular Weight (kDa) 68499.9
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4ALF HYDROLASE 03/02/12 Pseudomonas fluorescens PhoX in complex with phosphate PSEUDOMONAS FLUORESCENS 1.25 X-RAY DIFFRACTION 90.0
4A9V HYDROLASE 11/28/11 Pseudomonas fluorescens PhoX PSEUDOMONAS FLUORESCENS 1.1 X-RAY DIFFRACTION 90.0
3ZWU HYDROLASE 08/02/11 Pseudomonas fluorescens PhoX in complex with vanadate, a transition state analogue PSEUDOMONAS FLUORESCENS 1.39 X-RAY DIFFRACTION 90.0
4A9X HYDROLASE 11/29/11 Pseudomonas fluorescens PhoX in complex with the substrate analogue AppCp PSEUDOMONAS FLUORESCENS 1.79 X-RAY DIFFRACTION 90.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 178 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002918 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5696

Human Homologs

References

No references are associated with this feature.