Pseudomonas protegens Pf-5, PFL_5707

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5707
Name
Replicon chromosome
Genomic location 6506594 - 6507715 (+ strand)

Cross-References

RefSeq YP_262765.1
GI 70732992
Entrez 3480079
INSDC AAY94897.1
NCBI Locus Tag PFL_5707
UniParc UPI000054E106
UniProtKB Acc Q4K4R8
UniProtKB ID Q4K4R8_PSEF5
UniRef100 UniRef100_Q4K4R8
UniRef50 UniRef50_Q4K4R8
UniRef90 UniRef90_Q4K4R8

Product

Feature Type CDS
Coding Frame 1
Product Name
PepSY-associated membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.30
Kyte-Doolittle Hydrophobicity Value 0.294
Molecular Weight (kDa) 41158.0
Isoelectric Point (pI) 8.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 124 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003508 (498 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5707

Human Homologs

References

No references are associated with this feature.