Pseudomonas protegens Pf-5, PFL_5797

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5797
Name
Replicon chromosome
Genomic location 6604260 - 6604664 (- strand)

Cross-References

RefSeq YP_262855.1
GI 70733082
Entrez 3480169
INSDC AAY94987.1
NCBI Locus Tag PFL_5797
UniParc UPI000054E160
UniProtKB Acc Q4K4H8
UniProtKB ID Q4K4H8_PSEF5
UniRef100 UniRef100_Q4K4H8
UniRef50 UniRef50_G0L7T9
UniRef90 UniRef90_Q48PB4

Product

Feature Type CDS
Coding Frame 1
Product Name
thioesterase
Synonyms
Evidence for Translation
Charge (pH 7) -0.56
Kyte-Doolittle Hydrophobicity Value -0.275
Molecular Weight (kDa) 15.1
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 194 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000440 (503 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5797
Search term: thioesterase

Human Homologs

References

No references are associated with this feature.