Pseudomonas protegens Pf-5, PFL_5811 (mdcR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
| Locus Tag |
PFL_5811
|
| Name |
mdcR
|
| Replicon | chromosome |
| Genomic location | 6619015 - 6619932 (+ strand) |
Cross-References
| RefSeq | YP_262869.1 |
| GI | 70733096 |
| Entrez | 3480183 |
| INSDC | AAY95001.1 |
| NCBI Locus Tag | PFL_5811 |
| UniParc | UPI000054E16E |
| UniProtKB Acc | Q4K4G4 |
| UniProtKB ID | Q4K4G4_PSEF5 |
| UniRef100 | UniRef100_Q4K4G4 |
| UniRef50 | UniRef50_Q4K4G4 |
| UniRef90 | UniRef90_Q4K4G4 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
malonate utilization transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.64 |
| Kyte-Doolittle Hydrophobicity Value | 0.031 |
| Molecular Weight (kDa) | 34081.0 |
| Isoelectric Point (pI) | 5.99 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 446 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000216 (492 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_5811
Search term: mdcR
Search term: malonate utilization transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.