Pseudomonas protegens Pf-5, PFL_6075 (tagR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6075
Name
tagR
Replicon chromosome
Genomic location 6896215 - 6897927 (- strand)

Cross-References

RefSeq YP_263133.1
GI 70733358
Entrez 3480445
INSDC AAY95263.1
NCBI Locus Tag PFL_6075
UniParc UPI000054E272
UniProtKB Acc Q4K3Q0
UniProtKB ID Q4K3Q0_PSEF5
UniRef100 UniRef100_Q4K3Q0
UniRef50 UniRef50_Q4K3Q0
UniRef90 UniRef90_Q4K3Q0

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion posttranslational regulatory protein TagR
Synonyms
Evidence for Translation
Charge (pH 7) -2.31
Kyte-Doolittle Hydrophobicity Value -0.348
Molecular Weight (kDa) 62248.9
Isoelectric Point (pI) 6.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 91 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000070 (427 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6075
Search term: tagR

Human Homologs

References

No references are associated with this feature.