Pseudomonas protegens Pf-5, PFL_6083 (tssK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6083
Name
tssK
Replicon chromosome
Genomic location 6909144 - 6910478 (- strand)

Cross-References

RefSeq YP_263141.1
GI 70733366
Entrez 3480453
INSDC AAY95271.1
NCBI Locus Tag PFL_6083
UniParc UPI000054E27A
UniProtKB Acc Q4K3P2
UniProtKB ID Q4K3P2_PSEF5
UniRef100 UniRef100_Q4K3P2
UniRef50 UniRef50_Q4K3P2
UniRef90 UniRef90_Q4K3P2

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssK
Synonyms
Evidence for Translation
Charge (pH 7) -4.65
Kyte-Doolittle Hydrophobicity Value -0.089
Molecular Weight (kDa) 48687.0
Isoelectric Point (pI) 6.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000078 (882 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6083
Search term: tssK

Human Homologs

References

No references are associated with this feature.