Pseudomonas protegens Pf-5, PFL_6084 (tssJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6084
Name
tssJ
Replicon chromosome
Genomic location 6910494 - 6911000 (- strand)

Cross-References

RefSeq YP_263142.1
GI 70733367
Entrez 3480454
INSDC AAY95272.1
NCBI Locus Tag PFL_6084
UniParc UPI000054E27B
UniProtKB Acc Q4K3P1
UniProtKB ID Q4K3P1_PSEF5
UniRef100 UniRef100_Q4K3P1
UniRef50 UniRef50_Q4K3P1
UniRef90 UniRef90_Q4K3P1

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion lipoprotein TssJ
Synonyms
Evidence for Translation
Charge (pH 7) -1.80
Kyte-Doolittle Hydrophobicity Value -0.050
Molecular Weight (kDa) 18.1
Isoelectric Point (pI) 5.22

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 71 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000079 (838 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6084
Search term: tssJ

Human Homologs

References

No references are associated with this feature.