Pseudomonas protegens Pf-5, PFL_6090 (tssE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6090
Name
tssE
Replicon chromosome
Genomic location 6916836 - 6917351 (+ strand)

Cross-References

RefSeq YP_263148.2
GI 346643328
Entrez 3480460
INSDC AAY95278.2
NCBI Locus Tag PFL_6090
UniParc UPI00021A010A
UniProtKB Acc Q4K3N5
UniProtKB ID Q4K3N5_PSEF5
UniRef100 UniRef100_Q4K3N5
UniRef50 UniRef50_A0A077LI73
UniRef90 UniRef90_Q4K3N5

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssE
Synonyms
Evidence for Translation
Charge (pH 7) -2.80
Kyte-Doolittle Hydrophobicity Value -0.158
Molecular Weight (kDa) 18.8
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 64 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000086 (841 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6090
Search term: tssE

Human Homologs

References

No references are associated with this feature.