Pseudomonas protegens Pf-5, PFL_6091 (tssF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6091
Name
tssF
Replicon chromosome
Genomic location 6917348 - 6919207 (+ strand)

Cross-References

RefSeq YP_263149.1
GI 70733374
Entrez 3480461
INSDC AAY95279.1
NCBI Locus Tag PFL_6091
UniParc UPI000054E282
UniProtKB Acc Q4K3N4
UniProtKB ID Q4K3N4_PSEF5
UniRef100 UniRef100_Q4K3N4
UniRef50 UniRef50_Q4K3N4
UniRef90 UniRef90_Q4K3N4

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion protein TssF
Synonyms
Evidence for Translation
Charge (pH 7) -0.09
Kyte-Doolittle Hydrophobicity Value -0.288
Molecular Weight (kDa) 69.4
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 104 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000087 (1252 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6091
Search term: tssF

Human Homologs

References

No references are associated with this feature.