Pseudomonas protegens Pf-5, PFL_6100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6100
Name
Replicon chromosome
Genomic location 6931399 - 6932253 (- strand)

Cross-References

RefSeq YP_263158.2
GI 346643329
Entrez 3480470
INSDC AAY95288.2
NCBI Locus Tag PFL_6100
UniParc UPI00021A010B
UniProtKB Acc Q4K3M5
UniProtKB ID Q4K3M5_PSEF5
UniRef100 UniRef100_Q4K3M5
UniRef50 UniRef50_Q4K3M5
UniRef90 UniRef90_Q4K3M5

Product

Feature Type CDS
Coding Frame 1
Product Name
lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 17.52
Kyte-Doolittle Hydrophobicity Value -0.696
Molecular Weight (kDa) 31172.0
Isoelectric Point (pI) 10.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG021010 (11 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6100
Search term: lipoprotein

Human Homologs

References

No references are associated with this feature.