Pseudomonas protegens Pf-5, PFL_6107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6107
Name
Replicon chromosome
Genomic location 6936056 - 6936439 (- strand)

Cross-References

RefSeq YP_263165.1
GI 70733390
Entrez 3480477
INSDC AAY95295.1
NCBI Locus Tag PFL_6107
UniParc UPI000054E292
UniProtKB Acc Q4K3L8
UniProtKB ID Q4K3L8_PSEF5
UniRef100 UniRef100_Q4K3L8
UniRef50 UniRef50_K4AR22
UniRef90 UniRef90_Q4K3L8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.16
Kyte-Doolittle Hydrophobicity Value -0.243
Molecular Weight (kDa) 13.8
Isoelectric Point (pI) 8.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 103 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004924 (476 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6107

Human Homologs

References

No references are associated with this feature.