Pseudomonas protegens Pf-5, PFL_6161

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6161
Name
Replicon chromosome
Genomic location 6996185 - 6999049 (- strand)

Cross-References

RefSeq YP_263219.1
GI 70733444
Entrez 3480531
INSDC AAY95349.1
NCBI Locus Tag PFL_6161
UniParc UPI000054E2C7
UniProtKB Acc Q4K3G4
UniProtKB ID Q4K3G4_PSEF5
UniRef100 UniRef100_Q4K3G4
UniRef50 UniRef50_Q4K3G4
UniRef90 UniRef90_Q4K3G4

Product

Feature Type CDS
Coding Frame 1
Product Name
sensory box/GGDEF domain/EAL domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.40
Kyte-Doolittle Hydrophobicity Value -0.059
Molecular Weight (kDa) 107.0
Isoelectric Point (pI) 6.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 522 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004258 (1005 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6161

Human Homologs

References

No references are associated with this feature.