Pseudomonas protegens Pf-5, PFL_6162 (uvrD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6162
Name
uvrD
Replicon chromosome
Genomic location 6999297 - 7001480 (+ strand)

Cross-References

RefSeq YP_263220.1
GI 70733445
EC Number 3.6.1.-
Entrez 3480532
INSDC AAY95350.1
NCBI Locus Tag PFL_6162
UniParc UPI000054E2C8
UniProtKB Acc Q4K3G3
UniProtKB ID Q4K3G3_PSEF5
UniRef100 UniRef100_Q4K3G3
UniRef50 UniRef50_Q48BM1
UniRef90 UniRef90_Q48BM1

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-dependent helicase II
Synonyms
Evidence for Translation
Charge (pH 7) -13.92
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 81.0
Isoelectric Point (pI) 5.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004994 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6162
Search term: uvrD

Human Homologs

References

No references are associated with this feature.