Pseudomonas protegens Pf-5, PFL_6165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6165
Name
Replicon chromosome
Genomic location 7003238 - 7003645 (+ strand)

Cross-References

RefSeq YP_263223.1
GI 70733448
Entrez 3480535
INSDC AAY95353.1
NCBI Locus Tag PFL_6165
UniParc UPI000054E2CB
UniProtKB Acc Q4K3G0
UniProtKB ID Q4K3G0_PSEF5
UniRef100 UniRef100_Q4K3G0
UniRef50 UniRef50_Q87TZ9
UniRef90 UniRef90_Q87TZ9

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -28.57
Kyte-Doolittle Hydrophobicity Value -0.160
Molecular Weight (kDa) 15.6
Isoelectric Point (pI) 3.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2PAG STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03/27/07 Crystal structure of protein PSPTO_5518 from Pseudomonas syringae pv. tomato PSEUDOMONAS SYRINGAE PV. TOMATO 1.6 X-RAY DIFFRACTION 94.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 12 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005061 (548 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6165

Human Homologs

References

No references are associated with this feature.