Pseudomonas protegens Pf-5, PFL_6200 (cdsA_2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6200
Name
cdsA_2
Replicon chromosome
Genomic location 7038801 - 7039733 (+ strand)

Cross-References

RefSeq YP_263258.2
GI 346643342
EC Number 2.7.7.41
Entrez 3480570
INSDC AAY95388.2
NCBI Locus Tag PFL_6200
UniParc UPI00021A0069
UniProtKB Acc Q4K3C5
UniProtKB ID Q4K3C5_PSEF5
UniRef100 UniRef100_Q4K3C5
UniRef50 UniRef50_A7GX02
UniRef90 UniRef90_Q4K3C5

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphatidate cytidylyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 5.85
Kyte-Doolittle Hydrophobicity Value 0.865
Molecular Weight (kDa) 34495.8
Isoelectric Point (pI) 9.24

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003033 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6200
Search term: cdsA_2

Human Homologs

References

No references are associated with this feature.